MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for ANKRD40CL Gene

Official Symbol ANKRD40CL Gene Type protein-coding
Full Name ANKRD40 C-terminal like Entrez 55018
Ensembl ID ENSG00000167117 HGNC 26080
Aliases C17orf73, LINC00483 Chromosome Location Chromosome 17, NC_000017.11 (50761030..50767577, complement)
Expression Biased expression in small intestine (RPKM 28.5), duodenum (RPKM 28.1) and 1 other tissue
Summary -

Paper for ANKRD40CL Gene

PMID Author Year ID in Paper
Conclusion
32293550 Min Luo 2020 LINC00483 Knockdown of LINC00483 inhibited gastric cancer development in vitro and in vivo by increasing miR-490-3p and decreasing MAPK1, elucidating a novel mechanism for understanding the development of gastric cancer.

Experiment for ANKRD40CL Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 30 30 qRT-PCR China No Reports Up - - LINC00483 level was increased in gastric cancer tissues and cells. . Besides, inhibition of LINC00483 decreased xenograft tumor growth by regulating miR-490-3p/MAPK1 axis. 32293550
cell line - - Cell viability assay; Invasion and migration assay; Flow cytometry - No Reports - - Knockdown of LINC00483 inhibited cells viability, migration and invasion but promoted apoptosis in gastric cancer cells. Knockdown of LINC00483 inhibited cells viability, migration and invasion but promoted apoptosis in gastric cancer cells. 32293550
cell line - - Luciferase reporter assay - No Reports - - - LINC00483 could increase MAPK1 expression by competitively sponging miR-490-3p. miR-490-3p overexpression suppressed gastric cancer development, which was abated by introduction of LINC00483 32293550
mice - - Xenograft mice models - No Reports - - - Knockdown of LINC00483 decreases tumor growth in gastric cancer xenograft model. 32293550

Function for ANKRD40CL Gene

Functional Type AUC Overall Survival Disease-free Survival
target - - -

Interaction for ANKRD40CL Gene

Interaction Gene Method PMID
miR-490-3p Luciferase reporter assay 32293550
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