MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for CASC15 Gene

Official Symbol CASC15 Gene Type lncRNA
Full Name cancer susceptibility 15 Entrez 401237
Ensembl ID - HGNC 28245
Aliases CANT, LINC00340, lnc-SOX4-1 Chromosome Location Chromosome 6, NC_000006.12 (21666413..22195820)
Expression Broad expression in ovary (RPKM 2.9), endometrium (RPKM 1.9) and 14 other tissues
Summary This gene produces a long non-coding RNA that may regulate cell proliferation. This RNA is upregulated in hepatocellular carcinoma, where it is thought to function as an oncogene. However, some splice variants of this gene may function as a tumor suppressor in neuroblastoma and other tumor types. Circular RNA variants were observed at this gene. [provided by RefSeq, Dec 2017]

Paper for CASC15 Gene

PMID Author Year ID in Paper
Conclusion
29272000 X-M Yao 2017 CASC15 The expression of LncRNA CASC15 was significantly higher in gastric cancer tissues and its expression was negatively correlated with the overall survival of clinical patients.

Experiment for CASC15 Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 60 42 qRT-PCR China No Reports Up Up - Expression of lncRNA CASC15 in gastric cancer tissue was higher than normal gastric epithelium. Clinical data analysis showed that the expression level of CASC15 was correlated with tumor size and TNM stage in clinical patients. 29272000
cell line - - Cell proliferation assay - No Reports - - Overexpression of LncRNA CASC15 promoted the proliferation of MKN28 cells. Overexpression of LncRNA CASC15 promoted the proliferation of MKN28 cells. 29272000

Function for CASC15 Gene

Functional Type AUC Overall Survival Disease-free Survival
prognosis - 0.013 -

Interaction for CASC15 Gene

Interaction Gene Method PMID
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