MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for CDK9 Gene

Official Symbol CDK9 Gene Type protein-coding
Full Name cyclin dependent kinase 9 Entrez 1025
Ensembl ID ENSG00000136807 HGNC 1780
Aliases C-2k, CDC2L4, CTK1, PITALRE, TAK Chromosome Location Chromosome 9, NC_000009.12 (127786034..127790792)
Expression Ubiquitous expression in ovary (RPKM 32.0), spleen (RPKM 23.0) and 25 other tissues
Summary The protein encoded by this gene is a member of the cyclin-dependent protein kinase (CDK) family. CDK family members are highly similar to the gene products of S. cerevisiae cdc28, and S. pombe cdc2, and known as important cell cycle regulators. This kinase was found to be a component of the multiprotein complex TAK/P-TEFb, which is an elongation factor for RNA polymerase II-directed transcription and functions by phosphorylating the C-terminal domain of the largest subunit of RNA polymerase II. This protein forms a complex with and is regulated by its regulatory subunit cyclin T or cyclin K. HIV-1 Tat protein was found to interact with this protein and cyclin T, which suggested a possible involvement of this protein in AIDS. [provided by RefSeq, Jul 2008]

Paper for CDK9 Gene

PMID Author Year ID in Paper
Conclusion
28701053 Yebin Lu 2018 CDK9 miR-613, as a tumour suppressor, involves in gastric cancer progression and metastasis by targeting CDK9, implying a novel potential therapeutic target for the treatment of gastric cancer.

Experiment for CDK9 Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 52 52 qRT-PCR China No Reports Up - - CDK9 was upregulated in gastric cancer and the CDK9 expression levels were inversely correlated with that of miR-613 in gastric cancer tissues. 28701053
cell line - - Luciferase reporter assay - No Reports - - - CDK9 is a direct target of miR-613 in gastric cancer 28701053

Function for CDK9 Gene

Functional Type AUC Overall Survival Disease-free Survival
target - - -

Interaction for CDK9 Gene

Interaction Gene Method PMID
miR-613 Luciferase reporter assay 28701053
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