MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for CEBPA Gene

Official Symbol CEBPA Gene Type protein-coding
Full Name CCAAT enhancer binding protein alpha Entrez 1050
Ensembl ID ENSG00000245848 HGNC 1833
Aliases C/EBP-alpha, CEBP Chromosome Location Chromosome 19, NC_000019.10 (33299934..33302564, complement)
Expression -
Summary This intronless gene encodes a transcription factor that contains a basic leucine zipper (bZIP) domain and recognizes the CCAAT motif in the promoters of target genes. The encoded protein functions in homodimers and also heterodimers with CCAAT/enhancer-binding proteins beta and gamma. Activity of this protein can modulate the expression of genes involved in cell cycle regulation as well as in body weight homeostasis. Mutation of this gene is associated with acute myeloid leukemia. The use of alternative in-frame non-AUG (GUG) and AUG start codons results in protein isoforms with different lengths. Differential translation initiation is mediated by an out-of-frame, upstream open reading frame which is located between the GUG and the first AUG start codons. [provided by RefSeq, Dec 2013]

Paper for CEBPA Gene

PMID Author Year ID in Paper
Conclusion
20386538 Regalo 2010 CEBPA C/EBP alpha (together with other members of the C/EBP family) has an active role in the control of differentiation and proliferation in normal gastric mucosa. In GC, loss of C/EBP alpha may be associated with the switch from a cellular differentiation to a cellular proliferation program, presumably as a consequence of Ras/MAPK pathway activation.

Experiment for CEBPA Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 54 - IHC Portugal No Reports - - - In GC, C/EBPa staining was mostly nuclear with some residual cytoplasmic positivity. In GC, C/ EBPa was considered downregulated in 30% of the tumors. No statistical significant relationships were found between C/EBPa expression and any clin- icopathological features of the cases. 20386538
cell line - - Cell proliferation assay - No Reports - - - We observed a significant decrease in proliferation in C/EBPa-transfected cells. 20386538

Function for CEBPA Gene

Functional Type AUC Overall Survival Disease-free Survival
mechanism - - -

Interaction for CEBPA Gene

Interaction Gene Method PMID
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