MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for COP1 Gene

Official Symbol COP1 Gene Type protein-coding
Full Name COP1 E3 ubiquitin ligase Entrez 64326
Ensembl ID ENSG00000143207 HGNC 17440
Aliases CFAP78, FAP78, RFWD2, RNF200 Chromosome Location Chromosome 1, NC_000001.11 (175944831..176209087, complement)
Expression Ubiquitous expression in testis (RPKM 5.8), colon (RPKM 4.2) and 25 other tissues
Summary -

Paper for COP1 Gene

PMID Author Year ID in Paper
Conclusion
23091414 Yuan-fang Li 2012 COP1 COP1 could play an important role in gastric cancer and might serve as a valuable prognostic marker and potential target for gene therapy in the treatment of gastric cancer.

Experiment for COP1 Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 40 40 qRT-PCR China No Reports Up - - The COP1 expression level was significantly higher in the 25 (62.5%) tumor-bearing tissues, com_x005fpared with the adjacent non-tumor tissues 23091414
tissue 22 22 Western blot China No Reports Up - - High COP1 protein expression in most tumor-bearing tissues compared with the matched adjacent non-tumor tissues. The correlated protein expression analysis revealed a negative correlation between COP1 and p53 in gastric cancer samples. 23091414
tissue 401 - IHC China No Reports - - - High COP1 expression was significantly correlated with T stage (P=0.030), M stage (P=0.048) and TNM stage (P=0.022). High expression of COP1 was significantly correlated with poor survival in gastric cancer patients (P<0.001). Cox regression analyses showed that COP1 expression was an independent predictor of overall survival. 23091414

Function for COP1 Gene

Functional Type AUC Overall Survival Disease-free Survival
prognosis - < 0.001 -

Interaction for COP1 Gene

Interaction Gene Method PMID
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