MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for EGFR Gene

Official Symbol EGFR Gene Type protein-coding
Full Name epidermal growth factor receptor Entrez 1956
Ensembl ID ENSG00000146648 HGNC 3236
Aliases ERBB, ERBB1, HER1, NISBD2, PIG61, mENA Chromosome Location Chromosome 7, NC_000007.14 (55019017..55211628)
Expression Broad expression in placenta (RPKM 36.6), skin (RPKM 15.6) and 22 other tissues
Summary The protein encoded by this gene is a transmembrane glycoprotein that is a member of the protein kinase superfamily. This protein is a receptor for members of the epidermal growth factor family. EGFR is a cell surface protein that binds to epidermal growth factor, thus inducing receptor dimerization and tyrosine autophosphorylation leading to cell proliferation. Mutations in this gene are associated with lung cancer. EGFR is a component of the cytokine storm which contributes to a severe form of Coronavirus Disease 2019 (COVID-19) resulting from infection with severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). [provided by RefSeq, Jul 2020]

Paper for EGFR Gene

PMID Author Year ID in Paper
Conclusion
30530570 Yan Jia 2019 EGFR A tumor-suppressive role of miR-1296-5p through the translational repression of oncogenic CDK6 and EGFR in gastric cancer.

Experiment for EGFR Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 40 40 IHC China No Reports - - - EGFR and CDK6 are up-regulated in GC and negatively correlated with miR-1296-5p 30530570
cell line - - Luciferase reporter assay - No Reports - - - EGFR and CDK6 are directly targets of miR-1296-5p 30530570

Function for EGFR Gene

Functional Type AUC Overall Survival Disease-free Survival
mechanism - - -

Interaction for EGFR Gene

Interaction Gene Method PMID
miR-1296-5p Luciferase reporter assay 30530570
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