MKGC: a curated molecular knowledgebase for gastric cancer


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Gene Summary for SKP2 Gene

Official Symbol SKP2 Gene Type protein-coding
Full Name S-phase kinase associated protein 2 Entrez 6502
Ensembl ID ENSG00000145604 HGNC 10901
Aliases FBL1, FBXL1, FLB1, p45 Chromosome Location Chromosome 5, NC_000005.10 (36152067..36184319)
Expression Broad expression in placenta (RPKM 19.8), lymph node (RPKM 3.9) and 22 other tissues
Summary This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbls class; in addition to an F-box, this protein contains 10 tandem leucine-rich repeats. This protein is an essential element of the cyclin A-CDK2 S-phase kinase. It specifically recognizes phosphorylated cyclin-dependent kinase inhibitor 1B (CDKN1B, also referred to as p27 or KIP1) predominantly in S phase and interacts with S-phase kinase-associated protein 1 (SKP1 or p19). In addition, this gene is established as a protooncogene causally involved in the pathogenesis of lymphomas. Alternative splicing of this gene generates three transcript variants encoding different isoforms. [provided by RefSeq, Jul 2011]

Paper for SKP2 Gene

PMID Author Year ID in Paper
Conclusion
27572672 Yanguang Wen 2016 Skp2 Abrogating the effects of Skp2 may effectively inhibit the growth of gastric cancer cells, which may be useful as a novel target in the clinical treatment of gastric cancer.

Experiment for SKP2 Gene

Sample Type Sample Number GC Sample Number nonGC Method Region Hpylori Normal vs. GC Early-stage vs. Advanced stage Biological Functions in GC Cells Result PMID
tissue 47 19 Western blot China No Reports Up - - The expression levels of Skp2 in the gastric cancer tissues were significantly increased, compared with those in the normal gastric tissues 27572672
cell line - - Cell proliferation assay - No Reports - - Defective regulation of Skp2 or the presence of Skp2 inhibitor contribute to decreased proliferation in human gastric cancer cell lines.Skp2 inhibitor inhibits the proliferation of gastric cancer cells in a dose‑dependent manner Defective regulation of Skp2 or the presence of Skp2 inhibitor contribute to decreased proliferation in human gastric cancer cell lines.Skp2 inhibitor inhibits the proliferation of gastric cancer cells in a dose‑dependent manner 27572672
mice - - Xenograft mice models - No Reports - - - Interference with the endogenous expression of Skp2 inhibits tumor cell growth in nude mice. 27572672

Function for SKP2 Gene

Functional Type AUC Overall Survival Disease-free Survival
target - - -

Interaction for SKP2 Gene

Interaction Gene Method PMID
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